Writing Knowledge Work Plan

This note records the current plan for finishing the paper terminology, concept-language, findings, figures, and section-outline knowledge work before drafting the paper section by section.

Phase 1: Finish Concept Cleanup

Clear the remaining TODO-* notes by either integrating them into existing concept notes, promoting them into new atomic concept notes, or deleting them once their content has a home.

Initial disposition:

TODO notePlanned action
TODO-operational-def-strategy-variable.mdMostly covered by latent strategy, strategy alignment, and cross-input notes. Ingest remaining theory-facing parts into a recovery/theory language note.
TODO-problem-statement.mdPromote into a new concept note on the strategy-structure recovery problem.
TODO-failure-mode-reconstruction-neq-excess.mdIntegrate into Base-directed reconstruction objective as motivation: reconstruction NLL does not measure information from zz beyond xx on a stable scale.
TODO-semantically-consistent latent-variable decompositions.mdMostly covered by Cross-input semantic consistency. Ingest the remaining xx-dependent latent-permutation point into a theory/recovery language note.
TODO-solution-framing-adaptivity.mdSplit between Problem framing and Base-directed reconstruction objective, then delete the scratch note.

Recommended order:

  1. Create the strategy-structure recovery problem concept note.
  2. Ingest theory language from path:paper/theory_section.
  3. Patch remaining motivation fragments into existing notes.
  4. Delete TODO notes once their content has a durable home.

Status as of 2026-05-04: the writing TODO notes listed above have been promoted, integrated, or removed. The remaining work is to review the resulting concept notes for paper-level consistency and then proceed to findings, figures, and section outlines.

Phase 2: Theory Language Ingestion

Create a focused writing concept note, likely writing/concepts/strategy-recovery-theory-language.md.

The note should record weak recovery, strong recovery, recovery distances at the writing level, profiled ELBO margin language, and the role of complexity/simple-router-generator bias in selecting globally meaningful latent structure. The note should cite path:paper/theory_section as source material but should not replace the formal theory files.

Phase 3: Findings And Figures

Update the claim and figure planning notes using the settled terminology.

Targets:

  • revise Claims, especially outdated language around reconstruction metrics and method variants;
  • update figure notes, especially the reconstruction/alignment frontier figure, with base-relative reconstruction Rθ\mathcal R_\theta, residual surprise explained by zz, alignment-reconstruction frontier, and the figure labels ELBO, β\beta-ELBO, global scale, token weighting, global + token, and token inverse;
  • decide the main-body versus appendix figure set.

Phase 4: Section-By-Section Outline

After the concept language and findings are stable, populate writing/sections/ with high-level section planning notes rather than prose drafts.

Candidate section notes:

  • 01-introduction.md
  • 02-problem-statement.md
  • 03-methodology.md
  • 04-experiments.md
  • 05-theory.md
  • 06-discussion.md if needed

Each section note should record the section purpose, concepts required, claims delivered, figures used, and open writing decisions. It should not yet be a full prose draft.

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